Spa_g49306 (MBD05, MBD5, ATMBD5)

Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g49306

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008918	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g044028	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02034	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27247	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0043015	gamma-tubulin binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	361	416

External Links

No external refs found!