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  5. Spa_g49405

Spa_g49405 (TET8)


Aliases : TET8

Description : regulatory protein *(TET8/9) of extracellular vesicle trafficking & original description: none


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49405

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g04495 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ala_g18386 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Ala_g30227 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Als_g02930 No alias regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Als_g07041 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aob_g16586 TET10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05899 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.07 OrthoFinder output from all 47 species
Aspi01Gene27570.t1 TET8, Aspi01Gene27570 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27962.t1 TET8, Aspi01Gene27962 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53384.t1 TET7, Aspi01Gene53384 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Cba_g11158 TET10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G034400.1 TET8, Ceric.09G034400 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ceric.33G027300.1 TET8, Ceric.33G027300 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Ceric.37G039800.1 TET8, Ceric.37G039800 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Dcu_g07380 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Dcu_g07433 TET10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27470 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g37510.1 TET2, LOC_Os06g37510 Tetraspanin-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g48224 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.09 OrthoFinder output from all 47 species
MA_391725g0010 TET2 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g10130.1 TET10 Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g04153 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Nbi_g09530 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15840 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.07 OrthoFinder output from all 47 species
Ppi_g19985 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06083 No alias regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Smo91172 TET10 Tetraspanin-10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g00532 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 147 391
No external refs found!