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  5. Spa_g49511

Spa_g49511 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49511

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264070 CDF3,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G28310 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G52440 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
Adi_g024682 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050522 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075098 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g110724 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13677 CDF2 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11555 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18876 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27118 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13553.t1 CDF3, Aspi01Gene13553 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34893.t1 OBP4, Aspi01Gene34893 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44031.t1 Aspi01Gene44031 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033832 CDF3 transcription factor *(DOF) & original description: CDS=354-1853 0.03 OrthoFinder output from all 47 species
Cba_g19275 CDF3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26303 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71501 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72531 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43968 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19391 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26758 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12302 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16327 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27128 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28279 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g38870.1 LOC_Os03g38870 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os10g26620.1 CDF1, LOC_Os10g26620 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Len_g10091 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17943 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33176 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10735 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18526 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19390 TMO6 transcription factor *(DOF) & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g60948 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10910 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26562 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g069760.3.1 CDF3, Solyc06g069760 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Spa_g12133 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14068 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19759 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28492 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003086_P001 ADOF1, DOF1,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 65 121
No external refs found!