Spa_g49550


Description : Globulin-type seed storage protein *(CR) & original description: none


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g49550

Target Alias Description ECC score Gene Family Method Actions
AT1G03880 CRU2, CRB cruciferin 2 0.03 OrthoFinder output from all 47 species
AT4G28520 CRU3, CRC cruciferin 3 0.03 OrthoFinder output from all 47 species
AT5G44120 CRU1, CRA1, ATCRA1 RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g019882 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17834 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Als_g04891 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0152.g053400 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0152.g053408 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
MA_7329469g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9853020g0010 No alias 12S seed storage protein CRD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g25636 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g104100.3.1 Solyc01g104100 no description available(sp|a0a222nnm9|cos1_cocnu : 83.2) 0.02 OrthoFinder output from all 47 species
Tin_g36633 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38115 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 42 156
IPR006045 Cupin_1 255 395
No external refs found!