Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20571 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g36072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05315 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19909 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g30808 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34742 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g56780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001130.28 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g38468 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03842 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_117676g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_127785g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05393 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10123 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g25173 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g32051 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g32191 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20500 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23074 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23599 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07564 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002433 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16549 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33599 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38690 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50768 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g082870.1.1 | Solyc04g082870 | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014800_P001 | OTP82, Zm00001e014800 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| No external refs found! |
