Description : methylation reader *(MBD5-6) & original description: none
Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g061124 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11443 | ATMBD6, MBD6 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07123 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G068700.1 | MBD05, MBD5,... | methylation reader *(MBD5-6) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00835 | No alias | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13428 | ATMBD6, MBD6 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16308 | ATMBD6, MBD6 | methylation reader *(MBD5-6) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g10241 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09473 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0239.g026595 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: CDS=121-1635 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26548 | No alias | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g080690.4.1 | Solyc08g080690 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001739 | Methyl_CpG_DNA-bd | 333 | 383 |
| No external refs found! |
