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  5. Spa_g50005

Spa_g50005 (SOL1)


Aliases : SOL1

Description : TCX/CPP-type transcription factor & original description: none


Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50005
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Als_g14241 TSO1, ATTSO1 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07596 SOL1 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08956 TCX2, ATTCX2 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017242001 TCX2, ATTCX2 RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 OrthoFinder output from all 47 species
Nbi_g06810 SOL1 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 743 777
IPR005172 CRC 656 691
No external refs found!