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  5. Spa_g50011

Spa_g50011 (RBR, ATRBR1, RBR1, RB1, RB)


Aliases : RBR, ATRBR1, RBR1, RB1, RB

Description : regulatory protein (RBR) of cell cycle interphase & original description: none


Gene families : OG0002400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50011
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Als_g01960 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G003800.1 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.06 OrthoFinder output from all 47 species
Dde_g02382 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Nbi_g42458 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.1 OrthoFinder output from all 47 species
Ppi_g05934 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.06 OrthoFinder output from all 47 species
Tin_g11947 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0051726 regulation of cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR024599 RB_N 76 215
IPR002720 RB_A 393 593
IPR002719 RB_B 704 825
No external refs found!