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  5. Spa_g50133

Spa_g50133 (MMD1)


Aliases : MMD1

Description : transcriptional regulator *(MS1) & original description: none


Gene families : OG0003400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00102300 MS1,... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AMTR_s00043p00044990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder output from all 47 species
Aspi01Gene50229.t1 MMD1, Aspi01Gene50229 transcriptional regulator *(MS1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030666001 MMD1 RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50780.1 MMD1, LOC_Os03g50780 MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 OrthoFinder output from all 47 species
Mp3g06700.1 MMD1 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 684 729
No external refs found!