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  5. Spa_g50187

Spa_g50187


Description : not classified & original description: none


Gene families : OG0000483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50187
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Ala_g08026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45937.t1 Aspi01Gene45937 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.03G098300.1 Ceric.03G098300 not classified & original description: pacid=50571816... 0.04 OrthoFinder output from all 47 species
Ceric.30G035700.1 Ceric.30G035700 not classified & original description: pacid=50609500... 0.03 OrthoFinder output from all 47 species
Ceric.37G034300.1 Ceric.37G034300 not classified & original description: pacid=50616071... 0.04 OrthoFinder output from all 47 species
Dde_g16101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g05930.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g08060.1 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g05446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022661 No alias not classified & original description: CDS=1-1599 0.04 OrthoFinder output from all 47 species
Spa_g56977 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 461 509
IPR002110 Ankyrin_rpt 98 183
IPR002110 Ankyrin_rpt 187 246
IPR002110 Ankyrin_rpt 325 393
No external refs found!