1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g50970

Spa_g50970


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g50970
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AT5G23280 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042743 AtTCP14, TCP14 TCP-type transcription factor & original description: CDS=1-1476 0.04 OrthoFinder output from all 47 species
Dcu_g19331 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os08g43160.1 LOC_Os08g43160 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os12g07480.1 LOC_Os12g07480 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Lfl_g15294 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35770 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g103780.4.1 Solyc01g103780 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc06g070900.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc08g080150.1.1 Solyc08g080150 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e016271_P001 Zm00001e016271 transcription factor (TCP). CHE circadian clock repression factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 149 265
No external refs found!