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  5. Spa_g51308

Spa_g51308 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51308

Target Alias Description ECC score Gene Family Method Actions
AT2G33110 ATVAMP723, VAMP723 vesicle-associated membrane protein 723 0.02 OrthoFinder output from all 47 species
AT2G33120 SAR1, ATVAMP722, VAMP722 synaptobrevin-related protein 1 0.02 OrthoFinder output from all 47 species
AT4G15780 ATVAMP724, VAMP724 vesicle-associated membrane protein 724 0.03 OrthoFinder output from all 47 species
Cre04.g224750 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Dde_g00287 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
MA_85409g0010 VAMP727, ATVAMP727 VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
MA_945343g0010 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.05 OrthoFinder output from all 47 species
Mp7g07410.1 ATVAMP721,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Pnu_g03767 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 144 230
IPR010908 Longin_dom 33 97
No external refs found!