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  5. Spa_g51371

Spa_g51371


Description : not classified & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51371
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.03 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 OrthoFinder output from all 47 species
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04035 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10583 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53230.t1 LRX2, Aspi01Gene53230 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69387.t1 LRX2, Aspi01Gene69387 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.05 OrthoFinder output from all 47 species
Azfi_s0050.g031015 No alias LRR-domain extensin & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Cba_g04597 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32918 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.06 OrthoFinder output from all 47 species
Len_g08774 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.04 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02020 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e025924_P001 LRX2, Zm00001e025924 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008610 lipid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 73 105
No external refs found!