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  5. Spa_g51778

Spa_g51778


Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51778
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 HEC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00133p00027110 BPEp, ZCW32,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AT1G27740 RSL4 root hair defective 6-like 4 0.05 OrthoFinder output from all 47 species
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.03 OrthoFinder output from all 47 species
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G58010 LRL3 LJRHL1-like 3 0.04 OrthoFinder output from all 47 species
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g085081 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aev_g17433 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aev_g39005 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g26070 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26152 No alias regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Als_g01540 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g01664 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g04401 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09007 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g10281 HEC3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12831 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aob_g25678 BEE2 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g15698 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g41589 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g60014 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01205.t1 CIB1, Aspi01Gene01205 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28550.t1 CIB1, Aspi01Gene28550 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene56356.t1 LRL1, Aspi01Gene56356 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g026959 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034059 RHD6 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0319.g064443 RSL2 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0482.g073137 LRL3 bHLH-type transcription factor & original description: CDS=1-1173 0.03 OrthoFinder output from all 47 species
Azfi_s2566.g112182 CIB1 regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g17686 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.03G025300.1 RHD6, Ceric.03G025300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G045500.1 Ceric.04G045500 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.08G020500.1 RSL2, Ceric.08G020500 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G055200.1 RSL2, Ceric.14G055200 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.16G014000.1 RHD6, Ceric.16G014000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G001900.1 CIB1, Ceric.17G001900 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z049600.1 Ceric.1Z049600 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.20G088200.1 RHD6, Ceric.20G088200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G021400.1 CIB5, Ceric.22G021400 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.26G029500.1 Ceric.26G029500 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dac_g03262 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.07 OrthoFinder output from all 47 species
Dac_g09299 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dac_g09865 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dac_g11083 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g16940 No alias regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Dac_g31685 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Ehy_g05767 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g06624 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g18802 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Gb_39758 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g67480.1 LOC_Os01g67480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g68700.1 LOC_Os01g68700 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05010.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32510.1 LOC_Os09g32510 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g39850.1 RSL4, LOC_Os12g39850 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g13542 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Len_g36064 CIB5 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Lfl_g08868 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g21331 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
MA_100071g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10156436g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_10344244g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_138148g0010 RHD6 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_306658g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_78485g0010 RSL4 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g14891 BPEp, ZCW32, BPE, BPEub regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Msp_g15071 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24040 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g33520 CIB1 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Ore_g31547 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44492 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Pir_g10238 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10832 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34122 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pp3c16_21590V3.1 HEC2, Pp3c16_21590 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 OrthoFinder output from all 47 species
Pp3c17_17000V3.1 LRL1, Pp3c17_17000 LJRHL1-like 1 0.02 OrthoFinder output from all 47 species
Pp3c20_590V3.1 CIB5, Pp3c20_590 cryptochrome-interacting basic-helix-loop-helix 5 0.02 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Ppi_g33350 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60624 CIB1 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Ppi_g62088 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008184 No alias bHLH-type transcription factor & original description: CDS=1-762 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011925 HEC2 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018070 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026543 No alias bHLH-type transcription factor & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Sam_g43944 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Solyc01g107140.3.1 Solyc01g107140 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc01g109700.3.1 CIB1, Solyc01g109700 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc02g091440.2.1 RHD6, Solyc02g091440 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc02g093280.2.1 SPT, Solyc02g093280 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc03g044460.1.1 HEC2, Solyc03g044460 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc04g005220.3.1 Solyc04g005220 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc04g077960.1.1 RSL2, Solyc04g077960 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc07g005400.3.1 LRL1, Solyc07g005400 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc11g005780.3.1 HEC3, Solyc11g005780 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g010170.2.1 LRL1, Solyc12g010170 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g088380.1.1 RSL2, Solyc12g088380 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc12g098620.2.1 Solyc12g098620 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Spa_g05058 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g11218 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33531 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41645 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51777 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Tin_g10179 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Tin_g11732 HEC1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31631 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Tin_g45190 LRL3 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e009823_P002 LRL1, Zm00001e009823 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e010060_P001 Zm00001e010060 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e015045_P002 Zm00001e015045 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e015610_P001 RHD6, Zm00001e015610 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e020012_P001 Zm00001e020012 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e025656_P001 RHD6, Zm00001e025656 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e028489_P003 Zm00001e028489 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Zm00001e034605_P003 Zm00001e034605 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e035422_P001 RSL4, Zm00001e035422 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e037598_P001 Zm00001e037598 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 216 263
No external refs found!