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  5. Spa_g52118

Spa_g52118


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00175020 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G80530 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G34350 No alias Nodulin-like / Major Facilitator Superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G39210 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g009517 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g026166 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06102 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36894 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04964 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20049 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49029 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57837 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19925.t1 Aspi01Gene19925 UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39642.t1 Aspi01Gene39642 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57698.t1 Aspi01Gene57698 UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14171 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G016400.1 Ceric.03G016400 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G037700.1 Ceric.04G037700 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G044900.1 Ceric.04G044900 UMF23-type solute transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g16430 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24760 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25303 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30669 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10986 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18173 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008084001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01016200001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033076001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g47810.1 LOC_Os03g47810 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
LOC_Os12g29950.1 LOC_Os12g29950 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os12g44070.1 LOC_Os12g44070 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
MA_10099391g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_138259g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_2615g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Msp_g42628 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28611 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16070 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g14082 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012235 No alias UMF23-type solute transporter & original description: CDS=48-1715 0.03 OrthoFinder output from all 47 species
Sam_g28803 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g111350.3.1 Solyc01g111350 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Solyc11g008200.2.1 Solyc11g008200 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Spa_g16972 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26859 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003676_P002 Zm00001e003676 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Zm00001e006027_P001 Zm00001e006027 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e011367_P001 Zm00001e011367 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Zm00001e017781_P001 Zm00001e017781 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e033020_P001 Zm00001e033020 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 22 265
No external refs found!