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  5. Spa_g52459

Spa_g52459


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52459
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g38371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009829 No alias not classified & original description: CDS=275-1165 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046176 No alias not classified & original description: CDS=153-617 0.04 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.04 OrthoFinder output from all 47 species
Ceric.05G008700.1 Ceric.05G008700 not classified & original description: pacid=50577231... 0.03 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.03 OrthoFinder output from all 47 species
Gb_00237 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
Gb_14999 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43690.1 LOC_Os05g43690 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g28329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12104 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27804 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015092 No alias not classified & original description: CDS=288-854 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021452 No alias not classified & original description: CDS=113-766 0.03 OrthoFinder output from all 47 species
Sam_g06584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13221 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038052_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 46 121
No external refs found!