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  5. Spa_g53365

Spa_g53365


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53365

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.05 OrthoFinder output from all 47 species
Ala_g32401 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g37029 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01958.t1 Aspi01Gene01958 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z063200.1 Ceric.1Z063200 2S globulin seed storage protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z210800.1 Ceric.1Z210800 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z224900.1 Ceric.1Z224900 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g07284 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11599 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 193 321
IPR018392 LysM_dom 65 107
IPR018392 LysM_dom 9 50
No external refs found!