Spa_g53704


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53704
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Adi_g002881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g034749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06798 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g27909 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61873 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03544 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04200 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14024 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28216 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31176 LPA66 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g42334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59647 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68087 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68088 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32771 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07396 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38587 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10164206g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_525914g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28511 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36039 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38323 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04335 MEF22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10306 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57069 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g42119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53912 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007679 OTP86 not classified & original description: CDS=1-4497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025786 No alias not classified & original description: CDS=42-3869 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026446 No alias not classified & original description: CDS=292-2991 0.02 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55041 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1357 1414
IPR002885 Pentatricopeptide_repeat 564 586
IPR002885 Pentatricopeptide_repeat 794 823
IPR002885 Pentatricopeptide_repeat 694 720
IPR002885 Pentatricopeptide_repeat 868 889
IPR002885 Pentatricopeptide_repeat 463 485
IPR002885 Pentatricopeptide_repeat 993 1023
IPR002885 Pentatricopeptide_repeat 1195 1225
IPR002885 Pentatricopeptide_repeat 766 791
IPR002885 Pentatricopeptide_repeat 895 921
IPR002885 Pentatricopeptide_repeat 1305 1324
IPR002885 Pentatricopeptide_repeat 965 989
IPR002885 Pentatricopeptide_repeat 160 182
IPR002885 Pentatricopeptide_repeat 1091 1138
IPR002885 Pentatricopeptide_repeat 489 537
IPR002885 Pentatricopeptide_repeat 85 132
IPR002885 Pentatricopeptide_repeat 590 626
IPR002885 Pentatricopeptide_repeat 287 334
IPR002885 Pentatricopeptide_repeat 1227 1274
IPR002885 Pentatricopeptide_repeat 186 233
IPR002885 Pentatricopeptide_repeat 388 432
No external refs found!