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  5. Spa_g54524

Spa_g54524 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54524
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00210070 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00080p00087770 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00055880 OBP4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
Adi_g007394 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078152 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08221 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51755 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14979 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18876 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08641 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09379 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04480 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G013700.1 TMO6, Ceric.19G013700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G037300.1 TMO6, Ceric.26G037300 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g18747 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_20144 HCA2, DOF5.6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g55610.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g20781 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Msp_g25677 DAG1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38953 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06748 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41543 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16291 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18788 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05155 TMO6 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61204 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49468 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115940.4.1 CDF3, Solyc03g115940 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e010022_P001 OBP1, Zm00001e010022 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e019172_P001 Zm00001e019172 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e038479_P002 OBP3, Zm00001e038479 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 67 121
No external refs found!