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  4. Sequence
  5. Spa_g55449

Spa_g55449


Description : not classified & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55449

Target Alias Description ECC score Gene Family Method Actions
AT1G19220 ARF19, IAA22, ARF11 auxin response factor 19 0.04 OrthoFinder output from all 47 species
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.03 OrthoFinder output from all 47 species
Ala_g06409 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026103 ARF6 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035933 ARF6 not classified & original description: CDS=1-678 0.06 OrthoFinder output from all 47 species
Azfi_s0384.g067487 ARF8, ATARF8 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G089900.1 HSS, ARF1-BP,... ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g07132 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01011008001 HSS, ARF1-BP, ARF2, ORE14 RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
LOC_Os04g43910.1 ARF10, LOC_Os04g43910 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Pir_g41869 ARF17 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g082630.3.1 ARF9, Solyc08g082630 transcription factor (ARF) 0.05 OrthoFinder output from all 47 species
Zm00001e006640_P002 MP, IAA24, ARF5,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e012670_P001 ARF16, Zm00001e012670 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Zm00001e013061_P001 ARF16, Zm00001e013061 transcription factor (ARF) 0.05 OrthoFinder output from all 47 species
Zm00001e041866_P001 MP, IAA24, ARF5,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!