Spa_g55537 (DOT4)


Aliases : DOT4

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55537

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00248070 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00048330 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G31920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18840 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37527 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24134 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g23798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68696 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02312.t1 Aspi01Gene02312 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03455.t1 Aspi01Gene03455 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34804.t1 Aspi01Gene34804 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35047.t1 Aspi01Gene35047 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48128.t1 Aspi01Gene48128 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65851.t1 Aspi01Gene65851 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66061.t3 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023821 No alias not classified & original description: CDS=1-2478 0.05 OrthoFinder output from all 47 species
Azfi_s0040.g026628 No alias not classified & original description: CDS=1-2499 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033749 No alias not classified & original description: CDS=1-3141 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043616 No alias not classified & original description: CDS=1-3288 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044571 No alias not classified & original description: CDS=1-2829 0.05 OrthoFinder output from all 47 species
Azfi_s0109.g045373 No alias not classified & original description: CDS=1-2985 0.05 OrthoFinder output from all 47 species
Azfi_s0880.g091024 No alias not classified & original description: CDS=182-3622 0.05 OrthoFinder output from all 47 species
Cba_g65097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G019900.1 Ceric.02G019900 not classified & original description: pacid=50585305... 0.05 OrthoFinder output from all 47 species
Ceric.02G071100.1 Ceric.02G071100 not classified & original description: pacid=50585515... 0.04 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.05 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.04 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.04 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.05 OrthoFinder output from all 47 species
Ceric.33G002700.1 Ceric.33G002700 not classified & original description: pacid=50606600... 0.05 OrthoFinder output from all 47 species
Dcu_g38638 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g13218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
Gb_02573 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_31457 EMB2261 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Gb_33726 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.04 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Lfl_g05976 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_43727g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_442926g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_5858185g0010 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.07 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.06 OrthoFinder output from all 47 species
Msp_g03182 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g15551 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21090 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38509 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39535 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47992 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g04943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07924 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15429 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27966 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17052 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04505 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g13709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g46621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo123298 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Spa_g09894 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05998 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.05 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 22 67
No external refs found!