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  5. Spa_g55641

Spa_g55641 (UVR8)


Aliases : UVR8

Description : not classified & original description: none


Gene families : OG0004358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55641

Target Alias Description ECC score Gene Family Method Actions
Dde_g07716 UVR8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo181768 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 822 1118
IPR000408 Reg_chr_condens 283 332
IPR000408 Reg_chr_condens 231 280
IPR000408 Reg_chr_condens 181 228
IPR000408 Reg_chr_condens 338 384
IPR000408 Reg_chr_condens 124 173
IPR000408 Reg_chr_condens 75 121
IPR000408 Reg_chr_condens 388 439
No external refs found!