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  4. Sequence
  5. Spa_g55753

Spa_g55753


Description : not classified & original description: none


Gene families : OG0001508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55753
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT3G01450 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15830 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g055763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10095 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33184 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07933 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g14509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18559 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene22722.t1 Aspi01Gene22722 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G061200.1 Ceric.35G061200 not classified & original description: pacid=50581612... 0.03 OrthoFinder output from all 47 species
Dac_g08508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13657 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g00657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017734001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g70560.1 LOC_Os01g70560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g14353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434633g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9956900g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27479 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g40587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02249 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g09469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032334_P001 Zm00001e032334 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 259 415
No external refs found!