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  5. Spa_g56256

Spa_g56256


Description : deubiquitinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56256

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0139.g051213 No alias deubiquitinase & original description: CDS=368-799 0.03 OrthoFinder output from all 47 species
Cre17.g698100 No alias Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01009662001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os02g43840.1 LOC_Os02g43840 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Mp1g23750.1 No alias peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 23 153
No external refs found!