Spa_g57115


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g57115

Target Alias Description ECC score Gene Family Method Actions
Adi_g001943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g02338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g067390.3.1 Solyc02g067390 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 6 81
No external refs found!