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  5. Dcu_g01385

Dcu_g01385 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01385
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Als_g20640 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25397 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G077700.1 Ceric.11G077700 not classified & original description: pacid=50595996... 0.05 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.03 OrthoFinder output from all 47 species
Dac_g28355 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
Gb_21816 OPCL1 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
LOC_Os01g67530.1 LOC_Os01g67530 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
Len_g07586 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g10137 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07522 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42518 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37295 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17189 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo143817 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g069050.2.1 Solyc11g069050 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g094520.2.1 OPCL1, Solyc12g094520 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
Tin_g26630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 48 461
IPR025110 AMP-bd_C 470 545
No external refs found!