Dcu_g01780

Description : splicing factor *(CFM9) & original description: none

Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g01780

Target	Alias	Description	ECC score	Gene Family Method
AT4G13070	No alias	RNA-binding CRS1 / YhbY (CRM) domain protein	0.04	OrthoFinder output from all 47 species
Ceric.01G126500.1	Ceric.01G126500	splicing factor *(CFM9) & original description:...	0.03	OrthoFinder output from all 47 species
Ehy_g12917	No alias	splicing factor *(CFM9) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01032387001	No alias	Uncharacterized CRM domain-containing protein At3g25440,...	0.04	OrthoFinder output from all 47 species
MA_10427237g0020	No alias	Uncharacterized CRM domain-containing protein At3g25440,...	0.02	OrthoFinder output from all 47 species
MA_10436523g0010	No alias	Uncharacterized CRM domain-containing protein At3g25440,...	0.03	OrthoFinder output from all 47 species
Solyc06g082990.4.1	Solyc06g082990	Uncharacterized CRM domain-containing protein At3g25440,...	0.03	OrthoFinder output from all 47 species
Solyc07g047900.3.1	Solyc07g047900	Uncharacterized CRM domain-containing protein At3g25440,...	0.05	OrthoFinder output from all 47 species
Zm00001e027517_P001	Zm00001e027517	Uncharacterized CRM domain-containing protein At3g25440,...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	165	248

External Links

No external refs found!