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  5. Dcu_g02001

Dcu_g02001 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2

Description : component *(NRPE2) of RNA polymerase V complex & original description: none


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00247890 NRPC2,... DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G45140 NRPC2 nuclear RNA polymerase C2 0.01 OrthoFinder output from all 47 species
Aev_g12335 DRD2, NRPE2,... component *(NRPE2) of RNA polymerase V complex &... 0.01 OrthoFinder output from all 47 species
Azfi_s0115.g046267 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os04g54840.1 DRD2, NRPE2,... subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... 0.01 OrthoFinder output from all 47 species
Mp6g06170.1 NRPC2 subunit 2 of Pol III RNA polymerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007646 RNA_pol_Rpb2_4 594 654
IPR007647 RNA_pol_Rpb2_5 677 722
IPR007642 RNA_pol_Rpb2_2 274 419
IPR007644 RNA_pol_bsu_protrusion 33 457
IPR007120 DNA-dir_RNAP_su2_dom 730 1088
IPR007641 RNA_pol_Rpb2_7 1090 1179
IPR007645 RNA_pol_Rpb2_3 497 559
No external refs found!