Aliases : AtLa1, La1
Description : nascent RNA chaperone *(LA) & original description: none
Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g21508 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G010200.1 | AtLa1, La1,... | nascent RNA chaperone *(LA) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g11687 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035666001 | AtLa1, La1 | La protein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g39700.1 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g42010.1 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10212607g0010 | AtLa1, La1 | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.02 | OrthoFinder output from all 47 species | |
| MA_78251g0010 | AtLa1, La1 | La protein 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g04820.1 | AtLa1, La1 | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10339 | No alias | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10340 | No alias | nascent RNA chaperone *(LA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo168828 | AtLa1, La1 | La protein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g068310.3.1 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g31164 | AtLa1, La1 | nascent RNA chaperone *(LA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015074_P001 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041151_P001 | AtLa1, La1,... | RNA chaperone (LA). rRNA chaperone (IRP2) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016556 | mRNA modification | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0043484 | regulation of RNA splicing | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0050684 | regulation of mRNA processing | IEP | HCCA |
| BP | GO:0080009 | mRNA methylation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | HCCA |
| No external refs found! |
