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  5. Dcu_g03038

Dcu_g03038


Description : RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP complex & original description: none


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03038
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Adi_g026027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05402 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g02974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07216 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.18G070000.1 Ceric.18G070000 not classified & original description: pacid=50621590... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000525.2 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g009900 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g21558 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17377 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01020748001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_36818 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g53020.1 LOC_Os01g53020 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g10921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_213630g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_8214778g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_9152890g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g06753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g13780 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g33055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g07196 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g15415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g055260.3.1 Solyc07g055260 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09722 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028229_P001 Zm00001e028229 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e032179_P001 Zm00001e032179 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 360 422
No external refs found!