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  5. Dcu_g03209

Dcu_g03209


Description : Met-tRNA positioning component *(eIF5B) of initiator tRNA carrier complex & original description: none


Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03209
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT1G76820 No alias eukaryotic translation initiation factor 2 (eIF-2) family protein 0.06 OrthoFinder output from all 47 species
Ala_g02700 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.04 OrthoFinder output from all 47 species
Als_g22498 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species
Cba_g05986 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.04 OrthoFinder output from all 47 species
GSVIVT01034895001 No alias Protein biosynthesis.translation initiation.eIF5B... 0.05 OrthoFinder output from all 47 species
Ore_g16364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 919 1126
IPR004161 EFTu-like_2 1154 1231
IPR023115 TIF_IF2_dom3 1244 1356
No external refs found!