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  5. Dcu_g03883

Dcu_g03883


Description : subunit delta *(CCT4) of CCT chaperonin folding complex & original description: none


Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03883

Target Alias Description ECC score Gene Family Method Actions
AT3G18190 No alias TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Aev_g03918 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043269 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Cba_g04618 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ceric.29G021200.1 Ceric.29G021200 subunit delta *(CCT4) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Cre05.g234639 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.01 OrthoFinder output from all 47 species
Gb_12950 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
MA_18588g0010 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.08 OrthoFinder output from all 47 species
Msp_g07185 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.09 OrthoFinder output from all 47 species
Nbi_g00973 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Ore_g16303 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Pnu_g13623 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025263 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Solyc03g118910.1.1 Solyc03g118910 CCT4 subunit delta of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Spa_g12742 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Zm00001e000128_P002 Zm00001e000128 CCT4 subunit delta of CCT chaperonin folding complex 0.02 OrthoFinder output from all 47 species
Zm00001e023455_P001 Zm00001e023455 CCT4 subunit delta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 44 538
No external refs found!