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  5. Dcu_g03999

Dcu_g03999 (ATRGTA1, RGTA1)


Aliases : ATRGTA1, RGTA1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: none


Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03999
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Als_g05655 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ceric.01G053200.1 ATRGTA1, RGTA1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000350.27 No alias Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
GSVIVT01009190001 ATRGTA1, RGTA1 Vesicle trafficking.regulation of membrane tethering and... 0.09 OrthoFinder output from all 47 species
GSVIVT01009191001 ATRGTA1, RGTA1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
LOC_Os06g46380.1 RGTA2, ATRGTA2,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.11 OrthoFinder output from all 47 species
Len_g17135 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Lfl_g06062 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
MA_48992g0010 ATRGTA1, RGTA1 subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.01 OrthoFinder output from all 47 species
Msp_g11677 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Smo425072 ATRGTA1, RGTA1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Solyc04g076430.3.1 ATRGTA1, RGTA1,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.06 OrthoFinder output from all 47 species
Spa_g09072 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Tin_g11933 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Zm00001e012973_P001 RGTA2, ATRGTA2,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.02 OrthoFinder output from all 47 species
Zm00001e030328_P001 ATRGTA1, RGTA1,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008318 protein prenyltransferase activity IEA Interproscan
BP GO:0018342 protein prenylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002088 Prenyl_trans_a 47 74
IPR002088 Prenyl_trans_a 123 150
IPR002088 Prenyl_trans_a 88 117
IPR002088 Prenyl_trans_a 159 189
IPR002088 Prenyl_trans_a 205 234
No external refs found!