Aliases : AtMYB20, MYB20
Description : MYB class-R2R3 transcription factor & original description: none
Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g04810 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00257950 | AtMYB17, MYB17,... | Transcription factor MYB41 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00139p00079430 | ATMYB4, MYB4,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18710 | MYB47, AtMYB47 | myb domain protein 47 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G63910 | MYB103, AtMYB103 | myb domain protein 103 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G40330 | ATMYBRTF, ATMYB23, MYB23 | myb domain protein 23 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G62470 | MYBCOV1, MYB96, ATMYB96 | myb domain protein 96 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g10795 | ATMIXTA, MYB16, ATMYB16 | MYB class-R2R3 subgroup-8 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g13319 | ATMIXTA, MYB16, ATMYB16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g49556 | ATMIXTA, MYB16, ATMYB16 | MYB class-R2R3 subgroup-8 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g57386 | ATMIXTA, MYB16, ATMYB16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene21538.t1 | ATMYB101,... | MYB class-R2R3 subgroup-18 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61793.t1 | AtMYB85, MYB85,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene71679.t1 | MYB6, AtMYB6,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025508 | ATMYB46, MYB46 | not classified & original description: CDS=479-1312 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g00875 | ATMIXTA, MYB16, ATMYB16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g69919 | AtMYB40, MYB40 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23569 | MYB86, ATMYB86 | MYB class-R2R3 subgroup-13 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000449001 | ATMYB15, ATY19, MYB15 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003662001 | ATMYB102, ATM4, MYB102 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017716001 | ATMYB61, MYB61 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025034001 | ATMYB59-1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00379 | ATMIXTA, MYB16, ATMYB16 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_03227 | MYB84, RAX3, ATMYB84 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27494 | AtMYB20, MYB20 | Transcription factor MYB20 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g19330.1 | BOS1, AtMYB108,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g36460.1 | MYB86, ATMYB86,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g41510.1 | ATMYB15, ATY19,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g49986.1 | AtMYB20, MYB20,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g20090.1 | BOS1, AtMYB108,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43680.1 | ATMYB15, ATY19,... | transcription factor (MYB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g02250.1 | AtMYB93, MYB93,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g43580.1 | MYB30, ATMYB30,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10859g0010 | MYB36, AtMYB36 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_1261g0010 | ATMYB5, MYB5 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_128871g0010 | AtMYB20, MYB20 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_246142g0010 | ATMYB4, MYB4 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_278282g0010 | MYB3, ATMYB3 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_33964g0010 | AtMYB20, MYB20 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_6285g0010 | AtMYB17, MYB17 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8206949g0010 | AtMYB107, MYB107 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_97537g0010 | AtMYB93, MYB93 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g09420.1 | ATMIXTA, MYB16, ATMYB16 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g19516 | AtMYB20, MYB20 | MYB class-R2R3 subgroup-13 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g27213 | MYB8, HOS10 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_9330V3.1 | DUO1, Pp3c3_9330 | myb-like HTH transcriptional regulator family protein | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018975 | ATMIXTA, MYB16, ATMYB16 | not classified & original description: CDS=1-1983 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g057910.3.1 | AtMYB78, MYB78,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g079280.3.1 | ATMYB102, ATM4,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g025870.3.1 | MYB19, AtMYB19,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g074910.3.1 | MYB36, AtMYB36,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g005460.3.1 | ATMYB102, ATM4,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g099130.2.1 | BOS1, AtMYB108,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g37892 | AtMYB50, MYB50 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001492_P001 | BOS1, AtMYB108,... | transcription factor (MYB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e004568_P001 | ATMYB13, MYB13,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009831_P001 | ATMYB94,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010995_P001 | BOS1, AtMYB108,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017470_P001 | AtMYB112,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020993_P002 | AtMYB112,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024690_P001 | ATMYB4, MYB4,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027003_P001 | ATMYB4, MYB4,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035619_P002 | MYB30, ATMYB30,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038287_P001 | BOS1, AtMYB108,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041239_P001 | ATMYB15, ATY19,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
