Dcu_g05756


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05756

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00107400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g069231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13621 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24134 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14586.t2 Aspi01Gene14586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000662 No alias not classified & original description: CDS=1-2844 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010527 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038564 EMB2758 not classified & original description: CDS=1-2661 0.02 OrthoFinder output from all 47 species
Cba_g07165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36324 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67679 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G040400.1 Ceric.11G040400 not classified & original description: pacid=50596720... 0.03 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Ceric.20G051600.1 Ceric.20G051600 not classified & original description: pacid=50567347... 0.03 OrthoFinder output from all 47 species
Ceric.22G051900.1 Ceric.22G051900 not classified & original description: pacid=50614015... 0.03 OrthoFinder output from all 47 species
Ceric.26G017800.1 Ceric.26G017800 not classified & original description: pacid=50599016... 0.03 OrthoFinder output from all 47 species
Ceric.26G057900.1 CRR22, Ceric.26G057900 not classified & original description: pacid=50598962... 0.03 OrthoFinder output from all 47 species
Ceric.34G009600.1 Ceric.34G009600 not classified & original description: pacid=50623440... 0.03 OrthoFinder output from all 47 species
Ceric.34G069900.1 Ceric.34G069900 not classified & original description: pacid=50624195... 0.03 OrthoFinder output from all 47 species
Ceric.38G003200.1 Ceric.38G003200 not classified & original description: pacid=50580561... 0.03 OrthoFinder output from all 47 species
Dcu_g17044 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26819 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g14847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06767 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015410 No alias not classified & original description: CDS=1-2730 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Solyc07g045510.4.1 Solyc07g045510 RNA editing factor (MEF7) 0.02 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23771 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24933 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 670 716
IPR002885 Pentatricopeptide_repeat 365 412
IPR002885 Pentatricopeptide_repeat 770 816
IPR002885 Pentatricopeptide_repeat 568 614
IPR002885 Pentatricopeptide_repeat 467 514
IPR002885 Pentatricopeptide_repeat 264 312
IPR002885 Pentatricopeptide_repeat 168 196
IPR002885 Pentatricopeptide_repeat 642 666
IPR002885 Pentatricopeptide_repeat 844 868
No external refs found!