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  5. Dcu_g06330

Dcu_g06330 (CIB1)


Aliases : CIB1

Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06330
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g085081 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Adi_g088431 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g20444 No alias regulatory protein (CIB) of blue light perception &... 0.07 OrthoFinder output from all 47 species
Ala_g21170 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26066 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g04401 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08145 No alias regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Als_g22777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Als_g33622 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49595 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14421 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g38923 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g15803 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.07G026100.1 LRL3, Ceric.07G026100 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.14G055200.1 RSL2, Ceric.14G055200 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.19G069900.1 LRL3, Ceric.19G069900 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dde_g26546 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g06624 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g18802 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008628001 No alias External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
GSVIVT01020121001 No alias External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
Gb_21260 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g02110.1 RHD6, LOC_Os01g02110 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47660.1 CIB1, LOC_Os02g47660 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58830.1 LOC_Os03g58830 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g08500.1 LRL3, LOC_Os06g08500 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g41060.1 LOC_Os06g41060 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Len_g10068 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
MA_42080g0010 CIB1 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g24040 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Msp_g24041 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Nbi_g09354 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Nbi_g11730 No alias regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Pir_g24213 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Ppi_g02227 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ppi_g48576 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g62088 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011925 HEC2 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo405220 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
Solyc01g010130.4.1 Solyc01g010130 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc04g077960.1.1 RSL2, Solyc04g077960 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc06g008030.3.1 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Solyc12g100140.3.1 Solyc12g100140 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g05058 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g09944 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g29547 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g37930 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011410_P001 Zm00001e011410 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e025656_P001 RHD6, Zm00001e025656 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e035422_P001 RSL4, Zm00001e035422 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e038765_P001 Zm00001e038765 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 352 399
No external refs found!