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  5. Dcu_g06465

Dcu_g06465 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06465

Target Alias Description ECC score Gene Family Method Actions
Aev_g17880 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14453 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15341 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02900 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033396001 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g18544 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48047 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38740 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 568 597
IPR001313 Pumilio_RNA-bd_rpt 528 561
IPR001313 Pumilio_RNA-bd_rpt 492 525
IPR001313 Pumilio_RNA-bd_rpt 639 672
IPR001313 Pumilio_RNA-bd_rpt 714 745
IPR001313 Pumilio_RNA-bd_rpt 755 782
IPR001313 Pumilio_RNA-bd_rpt 675 696
IPR001313 Pumilio_RNA-bd_rpt 604 634
No external refs found!