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  5. Dcu_g06469

Dcu_g06469


Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06469

Target Alias Description ECC score Gene Family Method Actions
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g36629 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g28572 BBM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14196 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Als_g14935 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Als_g15824 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene20942.t1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g13334 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
LOC_Os03g12950.1 DRG, CKC, CKC1,... no description available(sp|q84z02|crl5_orysj : 102.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g56050.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os07g03250.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000274 AP2, FLO2, FL1 not classified & original description: CDS=216-980 0.04 OrthoFinder output from all 47 species
Sam_g36453 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g123430.4.1 Solyc03g123430 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc11g010710.2.1 PLT3, AIL6,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Tin_g10568 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 483 534
IPR001471 AP2/ERF_dom 382 440
No external refs found!