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  5. Dcu_g06887

Dcu_g06887 (GATA2)


Aliases : GATA2

Description : transcription factor *(A/B-GATA) & original description: none


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06887
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00074220 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.07 OrthoFinder output from all 47 species
AMTR_s00011p00253850 HAN, MNP,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00064p00107710 GATA22, CGA1,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00049970 BME3-ZF, BME3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G34680 GATA3 GATA transcription factor 3 0.03 OrthoFinder output from all 47 species
AT5G26930 GATA23 GATA transcription factor 23 0.05 OrthoFinder output from all 47 species
Adi_g016252 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088428 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02207 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17574 GATA9 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g00831 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07273 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38669 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48899 GATA4 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g21032 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09393 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene11897.t1 GATA15, Aspi01Gene11897 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53904.t1 GATA17, Aspi01Gene53904 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69371.t1 GATA12, Aspi01Gene69371 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02619 GATA2 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05826 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G090400.1 GATA12, Ceric.01G090400 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G070700.1 GATA20, Ceric.04G070700 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G000700.1 GATA12, Ceric.07G000700 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G063400.1 GATA12, Ceric.07G063400 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.25G025900.1 GATA9, Ceric.25G025900 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g06612 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07483 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10781 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23014 GATA4 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g34018 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05496 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06602 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g08197 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26857 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015204001 GNC, GATA21 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
LOC_Os01g24070.1 GATA23, LOC_Os01g24070 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os01g54210.1 GATA12, LOC_Os01g54210 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os03g05160.1 BME3-ZF, BME3,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45650.2 GATA5, LOC_Os04g45650 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os10g40810.1 GATA2, LOC_Os10g40810 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Len_g16587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03183 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28449 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434815g0010 GATA4 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
MA_70991g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g03950.1 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Msp_g06252 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14050 GATA19 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26719 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29814 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30519 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40724 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14533 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25235 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02097 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909 GATA9 transcription factor *(A/B-GATA) & original description:... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073 GATA9 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Solyc01g060490.4.1 GATA17, Solyc01g060490 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc04g015360.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc05g056120.3.1 BME3-ZF, BME3,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Solyc10g018560.2.1 GATA4, Solyc10g018560 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Spa_g12632 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55775 GATA12 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03941 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43678 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002326_P001 GATA4, Zm00001e002326 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e006272_P001 GATA17, Zm00001e006272 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e007391_P002 GATA5, Zm00001e007391 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e016165_P001 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e026256_P001 GATA23, Zm00001e026256 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e029060_P002 GATA9, Zm00001e029060 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e032219_P001 GATA12, Zm00001e032219 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 356 389
No external refs found!