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  5. Dcu_g06945

Dcu_g06945 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06945

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.06 OrthoFinder output from all 47 species
AT5G61400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g055417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06657 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18129 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g34015 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g15766 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009250 DOT4 not classified & original description: CDS=1-1692 0.07 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.05 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.05 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g03474 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g35238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30301 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31582 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.04 OrthoFinder output from all 47 species
Sam_g09876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28099 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 116
IPR002885 Pentatricopeptide_repeat 58 84
IPR002885 Pentatricopeptide_repeat 461 485
IPR002885 Pentatricopeptide_repeat 184 232
IPR002885 Pentatricopeptide_repeat 285 333
IPR002885 Pentatricopeptide_repeat 387 433
No external refs found!