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  5. Dcu_g07160

Dcu_g07160


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07160
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00232p00000850 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
Als_g55234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04906 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20531 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G115200.1 Ceric.01G115200 not classified & original description: pacid=50591005... 0.04 OrthoFinder output from all 47 species
Ceric.02G033100.1 Ceric.02G033100 not classified & original description: pacid=50586102... 0.03 OrthoFinder output from all 47 species
Ceric.02G044500.1 Ceric.02G044500 not classified & original description: pacid=50585717... 0.04 OrthoFinder output from all 47 species
Ceric.03G043000.1 Ceric.03G043000 not classified & original description: pacid=50572819... 0.03 OrthoFinder output from all 47 species
Ceric.05G036100.1 VAC1, ECB2,... not classified & original description: pacid=50578170... 0.04 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.04 OrthoFinder output from all 47 species
Ceric.38G046100.1 Ceric.38G046100 not classified & original description: pacid=50579564... 0.04 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25283 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06788 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08560 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08599 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g39841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45930 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47764 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g49215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 463 511
IPR002885 Pentatricopeptide_repeat 664 712
IPR002885 Pentatricopeptide_repeat 160 207
IPR002885 Pentatricopeptide_repeat 765 812
IPR002885 Pentatricopeptide_repeat 362 410
IPR002885 Pentatricopeptide_repeat 262 308
IPR002885 Pentatricopeptide_repeat 563 611
IPR046848 E_motif 883 944
IPR046849 Eplus_motif 950 973
IPR002885 Pentatricopeptide_repeat 840 865
IPR032867 DYW_dom 981 1073
No external refs found!