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  5. Dcu_g07162

Dcu_g07162


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07162

Target Alias Description ECC score Gene Family Method Actions
Adi_g036545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081561 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06035 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27882 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030882 CRR22 not classified & original description: CDS=1-1611 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031470 No alias not classified & original description: CDS=1-1512 0.03 OrthoFinder output from all 47 species
Azfi_s0471.g072918 No alias not classified & original description: CDS=1-3447 0.04 OrthoFinder output from all 47 species
Azfi_s0503.g073904 No alias not classified & original description: CDS=1-2580 0.03 OrthoFinder output from all 47 species
Azfi_s0626.g079975 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2118 0.03 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G001700.1 Ceric.28G001700 not classified & original description: pacid=50570577... 0.02 OrthoFinder output from all 47 species
Dac_g18747 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54953 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17690 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017029 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Sam_g11676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0008303 caspase complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 736 760
IPR002885 Pentatricopeptide_repeat 635 660
IPR002885 Pentatricopeptide_repeat 21 49
IPR002885 Pentatricopeptide_repeat 155 203
IPR002885 Pentatricopeptide_repeat 52 102
IPR002885 Pentatricopeptide_repeat 358 405
IPR002885 Pentatricopeptide_repeat 560 606
IPR002885 Pentatricopeptide_repeat 256 304
IPR002885 Pentatricopeptide_repeat 459 506
IPR002885 Pentatricopeptide_repeat 661 707
No external refs found!