Description : histone demethylase *(KDM5) & original description: none
Gene families : OG0001130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001130_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00253500 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G08620 | PKDM7D | Transcription factor jumonji (jmj) family protein / zinc... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G63490 | No alias | transcription factor jumonji (jmjC) domain-containing protein | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g055868 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107372 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g02655 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08112 | No alias | histone demethylase *(KDM5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05144 | No alias | histone demethylase *(KDM5) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g62631 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g13634 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g17236 | No alias | histone demethylase *(KDM5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene28386.t1 | Aspi01Gene28386 | histone demethylase *(KDM5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene68630.t1 | PKDM7D, Aspi01Gene68630 | histone demethylase *(PKDM7) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000131 | PKDM7D | histone demethylase *(PKDM7) & original description: CDS=166-5457 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G024900.1 | Ceric.01G024900 | histone demethylase *(KDM5) & original description:... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.09G000100.1 | PKDM7D, Ceric.09G000100 | histone demethylase *(PKDM7) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g01800 | No alias | histone demethylase *(KDM5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06623 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g21285 | PKDM7B, JMJ14 | histone demethylase *(PKDM7) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019761001 | No alias | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01023517001 | PKDM7D | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_26073 | No alias | histone demethylase (KDM5). transcription factor (JUMONJI) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_27431 | PKDM7D | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g10770.1 | PKDM7D, LOC_Os05g10770 | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g23670.1 | LOC_Os05g23670 | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14189 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18977 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04296 | No alias | histone demethylase *(KDM5) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| MA_10434186g0010 | PKDM7D | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436180g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_11526g0010 | No alias | Putative lysine-specific demethylase JMJ16... | 0.02 | OrthoFinder output from all 47 species | |
| MA_91656g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_97089g0010 | PKDM7D | Putative lysine-specific demethylase JMJ16... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9831023g0010 | No alias | transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g20340.1 | PKDM7D | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g17910.1 | No alias | histone demethylase (KDM5). transcription factor (JUMONJI) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g13349 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g38705 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g17312 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15994 | No alias | histone demethylase *(KDM5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g07515 | PKDM7D | histone demethylase *(PKDM7) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0050.g013848 | No alias | histone demethylase *(KDM5) & original description: CDS=319-5874 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11634 | No alias | histone demethylase *(KDM5) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g18668 | No alias | histone demethylase *(PKDM7) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g008490.3.1 | PKDM7D, Solyc06g008490 | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12700 | No alias | histone demethylase *(KDM5) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e030938_P001 | PKDM7D, Zm00001e030938 | histone demethylase (PKDM7). transcription factor (JUMONJI) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004198 | Znf_C5HC2 | 631 | 683 |
| IPR013637 | Lys_sp_deMease-like_dom | 734 | 968 |
| IPR013637 | Lys_sp_deMease-like_dom | 1237 | 1429 |
| IPR013637 | Lys_sp_deMease-like_dom | 966 | 1203 |
| IPR001606 | ARID_dom | 99 | 186 |
| IPR003347 | JmjC_dom | 422 | 538 |
| IPR019787 | Znf_PHD-finger | 1733 | 1793 |
| IPR019787 | Znf_PHD-finger | 252 | 297 |
| IPR003349 | JmjN | 29 | 62 |
| No external refs found! |
