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  5. Dcu_g07393

Dcu_g07393


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00214810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
AMTR_s00065p00088770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT3G49910 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
AT5G67510 No alias Translation protein SH3-like family protein 0.04 OrthoFinder output from all 47 species
Ala_g15510 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g33821 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.06G075600.1 Ceric.06G075600 component *(uL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g26116 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g24782 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_06102 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Len_g44310 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Nbi_g00193 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c14_25170V3.1 Pp3c14_25170 Translation protein SH3-like family protein 0.06 OrthoFinder output from all 47 species
Pp3c1_25000V3.1 Pp3c1_25000 Translation protein SH3-like family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Sam_g12169 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g25824 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g044000.1.1 Solyc03g044000 component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g06853 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g43201 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g54872 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005824 KOW 51 82
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
No external refs found!