Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00252600 | MEF1 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00230160 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g019759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034865 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036784 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g066055 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074266 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22769 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36508 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08806 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09923 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22756 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26998 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27910 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37344 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20851 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10966.t1 | Aspi01Gene10966 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18566.t1 | Aspi01Gene18566 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene68744.t1 | Aspi01Gene68744 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023505 | No alias | not classified & original description: CDS=32-2620 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0288.g063250 | No alias | not classified & original description: CDS=1-2010 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0503.g073904 | No alias | not classified & original description: CDS=1-2580 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0626.g079975 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2118 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35189 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G016200.1 | Ceric.12G016200 | not classified & original description: pacid=50601153... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06501 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08084 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08304 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08317 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08613 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16794 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g16809 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16815 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17049 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17197 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g17233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50973 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14560 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021576001 | BRCA1, ATBRCA1 | DNA damage response.BRCA1âBARD1 DNA-damage response... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04350 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12137 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_138676g0010 | EMB2261 | RNA editing factor (ECD1) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14104 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g28512 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34538 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g01771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17481 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20793 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36262 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g002023 | No alias | not classified & original description: CDS=1-2592 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006801 | EMB2261 | not classified & original description: CDS=90-2282 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012770 | No alias | not classified & original description: CDS=1-1605 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019336 | No alias | not classified & original description: CDS=1-1245 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g069500.1.1 | Solyc02g069500 | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g090220.3.1 | Solyc09g090220 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g44092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 237 | 262 |
| IPR002885 | Pentatricopeptide_repeat | 136 | 160 |
| IPR002885 | Pentatricopeptide_repeat | 464 | 512 |
| IPR002885 | Pentatricopeptide_repeat | 161 | 209 |
| IPR002885 | Pentatricopeptide_repeat | 263 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 363 | 410 |
| IPR046848 | E_motif | 582 | 628 |
| No external refs found! |
