1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g07779

Dcu_g07779


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07779

Target Alias Description ECC score Gene Family Method Actions
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18621 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28661 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27915.t1 Aspi01Gene27915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34770 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g35117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G010800.1 Ceric.13G010800 not classified & original description: pacid=50634967... 0.04 OrthoFinder output from all 47 species
Ceric.21G046100.1 Ceric.21G046100 not classified & original description: pacid=50602747... 0.03 OrthoFinder output from all 47 species
Ceric.27G036800.1 VAC1, ECB2,... not classified & original description: pacid=50605276... 0.03 OrthoFinder output from all 47 species
Dcu_g06788 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07656 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Len_g04345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06232 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14702 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32911 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27844 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03628 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo113974 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.03 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 1490 1581
IPR046849 Eplus_motif 1459 1482
IPR002885 Pentatricopeptide_repeat 570 617
IPR002885 Pentatricopeptide_repeat 1075 1122
IPR002885 Pentatricopeptide_repeat 1176 1222
IPR002885 Pentatricopeptide_repeat 875 920
IPR002885 Pentatricopeptide_repeat 469 511
IPR002885 Pentatricopeptide_repeat 369 414
IPR002885 Pentatricopeptide_repeat 774 818
IPR002885 Pentatricopeptide_repeat 974 1020
IPR002885 Pentatricopeptide_repeat 1276 1323
IPR002885 Pentatricopeptide_repeat 268 315
IPR002885 Pentatricopeptide_repeat 544 568
IPR002885 Pentatricopeptide_repeat 343 367
IPR002885 Pentatricopeptide_repeat 948 973
IPR002885 Pentatricopeptide_repeat 643 668
IPR002885 Pentatricopeptide_repeat 1251 1272
IPR002885 Pentatricopeptide_repeat 169 197
IPR002885 Pentatricopeptide_repeat 442 465
IPR002885 Pentatricopeptide_repeat 674 702
IPR002885 Pentatricopeptide_repeat 1049 1074
IPR002885 Pentatricopeptide_repeat 242 265
IPR002885 Pentatricopeptide_repeat 847 871
IPR046848 E_motif 1392 1454
No external refs found!