Dcu_g08285


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08285
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00228270 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44880 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G28640 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G14820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g034312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g042918 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07476 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g07982 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03124 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03709 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28692 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.02 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.04 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.05 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g04710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.28G044700.1 Ceric.28G044700 not classified & original description: pacid=50570014... 0.04 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12916 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008715001 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
GSVIVT01012206001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01021774001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Gb_06272 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_07106 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_14728 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_15639 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_18859 CRR2 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Gb_32439 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_35886 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os06g49185.1 LOC_Os06g49185 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Len_g16195 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_139163g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_16339g0010 CRR2 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_8491g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Msp_g03174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04377 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04514 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45771 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45895 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46073 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.02 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Solyc02g011680.4.1 Solyc02g011680 Pentatricopeptide repeat-containing protein At5g27110... 0.05 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.04 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc09g007040.1.1 Solyc09g007040 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
Solyc11g005970.1.1 Solyc11g005970 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Solyc12g042400.1.1 SLO1, Solyc12g042400 Pentatricopeptide repeat-containing protein At2g29760,... 0.04 OrthoFinder output from all 47 species
Tin_g34486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.04 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Zm00001e008183_P001 Zm00001e008183 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e012607_P002 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
Zm00001e020583_P001 Zm00001e020583 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e024311_P001 Zm00001e024311 Pentatricopeptide repeat-containing protein At1g09410,... 0.03 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.04 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e041246_P001 Zm00001e041246 Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 662 724
IPR002885 Pentatricopeptide_repeat 544 591
IPR002885 Pentatricopeptide_repeat 443 490
IPR002885 Pentatricopeptide_repeat 242 288
IPR002885 Pentatricopeptide_repeat 42 72
IPR002885 Pentatricopeptide_repeat 144 173
IPR002885 Pentatricopeptide_repeat 345 372
IPR002885 Pentatricopeptide_repeat 620 644
IPR002885 Pentatricopeptide_repeat 216 237
IPR002885 Pentatricopeptide_repeat 317 343
IPR002885 Pentatricopeptide_repeat 106 136
No external refs found!