Dcu_g08424


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08424

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g005491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g07720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12064 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g23781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19500.t1 Aspi01Gene19500 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62647.t1 Aspi01Gene62647 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13545 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01018877001 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62400.1 LOC_Os03g62400 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39970.1 LOC_Os09g39970 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18024 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33284 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g34161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g20567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41276 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44153 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g46019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42976 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g38675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04353 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g30637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g49219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59327 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo134581 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.06 OrthoFinder output from all 47 species
Smo91775 No alias Pentatricopeptide repeat-containing protein At4g25270,... 0.08 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g43745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 100
IPR002885 Pentatricopeptide_repeat 1 47
No external refs found!