Dcu_g08443


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08443

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00177680 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00158010 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G50270 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.03 OrthoFinder output from all 47 species
Adi_g097219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19105 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19294 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07344 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09077 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28594 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g43028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009229 No alias not classified & original description: CDS=1-2601 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.04 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024817 No alias not classified & original description: CDS=20-3643 0.04 OrthoFinder output from all 47 species
Azfi_s0047.g030252 No alias not classified & original description: CDS=1-2775 0.03 OrthoFinder output from all 47 species
Azfi_s0471.g072918 No alias not classified & original description: CDS=1-3447 0.03 OrthoFinder output from all 47 species
Cba_g05299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G018200.1 OTP84, Ceric.04G018200 not classified & original description: pacid=50630783... 0.05 OrthoFinder output from all 47 species
Ceric.04G106200.1 Ceric.04G106200 not classified & original description: pacid=50630879... 0.03 OrthoFinder output from all 47 species
Ceric.09G009700.1 Ceric.09G009700 not classified & original description: pacid=50587563... 0.03 OrthoFinder output from all 47 species
Ceric.12G036800.1 Ceric.12G036800 not classified & original description: pacid=50601765... 0.03 OrthoFinder output from all 47 species
Ceric.19G075900.1 Ceric.19G075900 not classified & original description: pacid=50576584... 0.03 OrthoFinder output from all 47 species
Ceric.1Z005100.1 Ceric.1Z005100 not classified & original description: pacid=50567700... 0.03 OrthoFinder output from all 47 species
Ceric.26G006200.1 Ceric.26G006200 not classified & original description: pacid=50598886... 0.03 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.04 OrthoFinder output from all 47 species
Dac_g03363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06433 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08863 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16950 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17098 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21328 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g24237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26715 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47941 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g05377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17754 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26141 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_935792g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15248 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13020 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007051 CRR22 not classified & original description: CDS=50-2191 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011851 OTP84 not classified & original description: CDS=1-2175 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018323 No alias not classified & original description: CDS=1-1728 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021689 No alias S-adenosyl methionine transporter *(GOSAMT) & original... 0.02 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.04 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.03 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17148 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021457_P001 CRR22, Zm00001e021457 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e023498_P001 VAC1, ECB2,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 140 173
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 22 68
No external refs found!