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  5. Dcu_g08450

Dcu_g08450


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08450
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
AMTR_s00006p00257350 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.01 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.01 OrthoFinder output from all 47 species
AMTR_s00022p00232590 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
AMTR_s00095p00039180 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.01 OrthoFinder output from all 47 species
Adi_g047468 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23823 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26069 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54594 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14575.t2 CRR22, Aspi01Gene14575 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18019.t1 Aspi01Gene18019 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18986.t1 MEF21, Aspi01Gene18986 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene20496.t1 CRR22, Aspi01Gene20496 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene29787.t2 Aspi01Gene29787 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34036.t1 CRR22, Aspi01Gene34036 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34782.t1 Aspi01Gene34782 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40269.t1 Aspi01Gene40269 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene41675.t1 CRR2, Aspi01Gene41675 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58744.t1 EMB2758, Aspi01Gene58744 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61170.t1 OTP84, Aspi01Gene61170 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene64480.t1 Aspi01Gene64480 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000442 No alias not classified & original description: CDS=1-3240 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011298 No alias not classified & original description: CDS=1-2325 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015640 No alias not classified & original description: CDS=1-1965 0.02 OrthoFinder output from all 47 species
Azfi_s0081.g038550 EMB2758 not classified & original description: CDS=1-1851 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043495 No alias not classified & original description: CDS=1-2592 0.06 OrthoFinder output from all 47 species
Azfi_s0099.g044113 No alias not classified & original description: CDS=1-1752 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g045915 CRR22 not classified & original description: CDS=197-1879 0.02 OrthoFinder output from all 47 species
Azfi_s0129.g048869 No alias not classified & original description: CDS=1-2157 0.02 OrthoFinder output from all 47 species
Azfi_s0349.g066473 No alias not classified & original description: CDS=1-1980 0.03 OrthoFinder output from all 47 species
Ceric.12G084700.1 Ceric.12G084700 not classified & original description: pacid=50602071... 0.02 OrthoFinder output from all 47 species
Ceric.19G003900.1 Ceric.19G003900 not classified & original description: pacid=50575192... 0.01 OrthoFinder output from all 47 species
Ceric.36G001100.1 Ceric.36G001100 not classified & original description: pacid=50568746... 0.02 OrthoFinder output from all 47 species
Ceric.36G012600.1 Ceric.36G012600 not classified & original description: pacid=50568766... 0.05 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g05106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16522 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01021576001 BRCA1, ATBRCA1 DNA damage response.BRCA1–BARD1 DNA-damage response... 0.01 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g05189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32647 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06762 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g23611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g22056 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001030 No alias not classified & original description: CDS=1-1857 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.14 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005702 No alias not classified & original description: CDS=46-1077 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008203 OTP86 not classified & original description: CDS=1-2439 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008518 No alias not classified & original description: CDS=1-1671 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009076 No alias not classified & original description: CDS=1-1737 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009681 No alias not classified & original description: CDS=1-2907 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010179 No alias not classified & original description: CDS=88-2685 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012043 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1878 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020618 REME1 not classified & original description: CDS=24-1478 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025587 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026000 No alias not classified & original description: CDS=66-1799 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026331 No alias not classified & original description: CDS=1-2598 0.03 OrthoFinder output from all 47 species
Sam_g29120 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g34587 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g49275 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Tin_g04082 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11929 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26215 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34821 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 95 141
No external refs found!